Analysis of Ligand-Protein Contacts in PDB entry:
2RMQ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 24 ligands in PDB entry 2RMQ. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
C4S
A
1 162'-DEOXY-4'-THIOCYTIDINE 5'-(DIHYDROGEN PH
lig 2
S4G
A
2 222'-DEOXY-4'-THIOGUANOSINE 5'-(DIHYDROGEN P
lig 3
C4S
A
3 192'-DEOXY-4'-THIOCYTIDINE 5'-(DIHYDROGEN PH
lig 4
S4G
A
4 222'-DEOXY-4'-THIOGUANOSINE 5'-(DIHYDROGEN P
lig 5
S4A
A
5 212'-DEOXY-4'-THIOADENOSINE 5'-(DIHYDROGEN P
lig 6
S4A
A
6 212'-DEOXY-4'-THIOADENOSINE 5'-(DIHYDROGEN P
lig 7
T49
A
7 20S4'-2'DEOXYTHYMIDINE 5'-MONOPHOSPHATE
lig 8
T49
A
8 20S4'-2'DEOXYTHYMIDINE 5'-MONOPHOSPHATE
lig 9
C4S
A
9 192'-DEOXY-4'-THIOCYTIDINE 5'-(DIHYDROGEN PH
lig 10
S4G
A
10 222'-DEOXY-4'-THIOGUANOSINE 5'-(DIHYDROGEN P
lig 11
C4S
A
11 192'-DEOXY-4'-THIOCYTIDINE 5'-(DIHYDROGEN PH
lig 12
S4G
A
12 222'-DEOXY-4'-THIOGUANOSINE 5'-(DIHYDROGEN P
lig 13
C4S
B
13 162'-DEOXY-4'-THIOCYTIDINE 5'-(DIHYDROGEN PH
lig 14
S4G
B
14 222'-DEOXY-4'-THIOGUANOSINE 5'-(DIHYDROGEN P
lig 15
C4S
B
15 192'-DEOXY-4'-THIOCYTIDINE 5'-(DIHYDROGEN PH
lig 16
S4G
B
16 222'-DEOXY-4'-THIOGUANOSINE 5'-(DIHYDROGEN P
lig 17
S4A
B
17 212'-DEOXY-4'-THIOADENOSINE 5'-(DIHYDROGEN P
lig 18
S4A
B
18 212'-DEOXY-4'-THIOADENOSINE 5'-(DIHYDROGEN P
lig 19
T49
B
19 20S4'-2'DEOXYTHYMIDINE 5'-MONOPHOSPHATE
lig 20
T49
B
20 20S4'-2'DEOXYTHYMIDINE 5'-MONOPHOSPHATE
lig 21
C4S
B
21 192'-DEOXY-4'-THIOCYTIDINE 5'-(DIHYDROGEN PH
lig 22
S4G
B
22 222'-DEOXY-4'-THIOGUANOSINE 5'-(DIHYDROGEN P
lig 23
C4S
B
23 192'-DEOXY-4'-THIOCYTIDINE 5'-(DIHYDROGEN PH
lig 24
S4G
B
24 222'-DEOXY-4'-THIOGUANOSINE 5'-(DIHYDROGEN P