Analysis of Ligand-Protein Contacts in PDB entry:
2RQO


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 28 ligands in PDB entry 2RQO. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
MHE
A
0 105,5-DIMETHYL-2-OXOHEXANOIC ACID
lig 2
I2M
A
2 93-METHYL-L-ALLOISOLEUCINE
lig 3
TBG
A
4 83-METHYL-L-VALINE
lig 4
TDD
A
5 8(2R)-2-AMINO-3,3-DIMETHYL-BUTANOIC ACID
lig 5
TBG
A
6 83-METHYL-L-VALINE
lig 6
DAL
A
7 5D-ALANINE
lig 7
TBG
A
8 83-METHYL-L-VALINE
lig 8
TDD
A
9 8(2R)-2-AMINO-3,3-DIMETHYL-BUTANOIC ACID
lig 9
TDD
A
13 8(2R)-2-AMINO-3,3-DIMETHYL-BUTANOIC ACID
lig 10
MND
A
15 9N-METHYL-D-ASPARAGINE
lig 11
HVA
A
16 83-HYDROXY-L-VALINE
lig 12
TBG
A
20 83-METHYL-L-VALINE
lig 13
MND
A
21 9N-METHYL-D-ASPARAGINE
lig 14
LMQ
A
22 10(3S)-3-METHYL-L-GLUTAMINE
lig 15
DHV
A
23 83-HYDROXY-D-VALINE
lig 16
MND
A
27 9N-METHYL-D-ASPARAGINE
lig 17
HTN
A
29 10(3R)-3-HYDROXY-N-METHYL-D-ASPARAGINE
lig 18
TBG
A
30 83-METHYL-L-VALINE
lig 19
DHV
A
31 83-HYDROXY-D-VALINE
lig 20
MND
A
33 9N-METHYL-D-ASPARAGINE
lig 21
MND
A
35 9N-METHYL-D-ASPARAGINE
lig 22
HTN
A
37 10(3R)-3-HYDROXY-N-METHYL-D-ASPARAGINE
lig 23
MND
A
39 9N-METHYL-D-ASPARAGINE
lig 24
DSN
A
41 6D-SERINE
lig 25
DSG
A
43 8D-ASPARAGINE
lig 26
M2S
A
44 113-{[(R)-METHYLSULFINYL]METHYL}-L-VALINE
lig 27
DSG
A
45 8D-ASPARAGINE
lig 28
2TL
A
47 7D-ALLOTHREONINE