Analysis of Ligand-Protein Contacts in PDB entry:
2VAR


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 2VAR. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
KDG
A
1313 122-KETO-3-DEOXYGLUCONATE
lig 2
KDF
A
1314 123-DEOXY-ALPHA-D-ERYTHRO-HEX-2-ULOFURANOSON
lig 3
ANP
A
1315 31PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTE
lig 4
AMP
A
1316 23ADENOSINE MONOPHOSPHATE
lig 5
KDG
B
1313 122-KETO-3-DEOXYGLUCONATE
lig 6
KDF
B
1314 123-DEOXY-ALPHA-D-ERYTHRO-HEX-2-ULOFURANOSON
lig 7
ANP
B
1315 31PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTE
lig 8
AMP
B
1316 23ADENOSINE MONOPHOSPHATE
lig 9
KDG
C
1313 122-KETO-3-DEOXYGLUCONATE
lig 10
KDF
C
1314 123-DEOXY-ALPHA-D-ERYTHRO-HEX-2-ULOFURANOSON
lig 11
ANP
C
1315 31PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTE
lig 12
AMP
C
1316 23ADENOSINE MONOPHOSPHATE