Analysis of Ligand-Protein Contacts in PDB entry:
2VGJ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 22 ligands in PDB entry 2VGJ. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
REC
A
500 25CEPHALOSPORIN
lig 2
SO4
A
600 5SULFATE ION
lig 3
SO4
A
601 5SULFATE ION
lig 4
SO4
A
602 5SULFATE ION
lig 5
SO4
A
603 5SULFATE ION
lig 6
MG
A
611 1MAGNESIUM ION
lig 7
REC
B
500 25CEPHALOSPORIN
lig 8
SO4
B
600 5SULFATE ION
lig 9
SO4
B
601 5SULFATE ION
lig 10
SO4
B
602 5SULFATE ION
lig 11
SO4
B
603 5SULFATE ION
lig 12
REC
C
500 25CEPHALOSPORIN
lig 13
SO4
C
600 5SULFATE ION
lig 14
SO4
C
601 5SULFATE ION
lig 15
SO4
C
602 5SULFATE ION
lig 16
SO4
C
603 5SULFATE ION
lig 17
REC
D
500 25CEPHALOSPORIN
lig 18
SO4
D
600 5SULFATE ION
lig 19
SO4
D
601 5SULFATE ION
lig 20
SO4
D
602 5SULFATE ION
lig 21
SO4
D
603 5SULFATE ION
lig 22
MG
D
611 1MAGNESIUM ION