Analysis of Ligand-Protein Contacts in PDB entry:
2VJY


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 19 ligands in PDB entry 2VJY. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
TPP
A
600 26THIAMINE DIPHOSPHATE
lig 2
MG
A
601 1MAGNESIUM ION
lig 3
ALK
A
602 8METHOXY-[(1~{R})-1-OXIDANYLETHYL]PHOSPHINI
lig 4
ALK
A
603 8METHOXY-[(1~{R})-1-OXIDANYLETHYL]PHOSPHINI
lig 5
ALU
A
604 8METHYL HYDROGEN (S)-ACETYLPHOSPHONATE
lig 6
TPP
B
600 26THIAMINE DIPHOSPHATE
lig 7
MG
B
601 1MAGNESIUM ION
lig 8
ALK
B
602 8METHOXY-[(1~{R})-1-OXIDANYLETHYL]PHOSPHINI
lig 9
ALK
B
603 8METHOXY-[(1~{R})-1-OXIDANYLETHYL]PHOSPHINI
lig 10
ALU
B
604 8METHYL HYDROGEN (S)-ACETYLPHOSPHONATE
lig 11
TPP
C
600 26THIAMINE DIPHOSPHATE
lig 12
MG
C
601 1MAGNESIUM ION
lig 13
ALK
C
602 8METHOXY-[(1~{R})-1-OXIDANYLETHYL]PHOSPHINI
lig 14
ALK
C
603 8METHOXY-[(1~{R})-1-OXIDANYLETHYL]PHOSPHINI
lig 15
ALU
C
604 8METHYL HYDROGEN (S)-ACETYLPHOSPHONATE
lig 16
TPP
D
600 26THIAMINE DIPHOSPHATE
lig 17
MG
D
601 1MAGNESIUM ION
lig 18
ALK
D
602 8METHOXY-[(1~{R})-1-OXIDANYLETHYL]PHOSPHINI
lig 19
ALK
D
603 8METHOXY-[(1~{R})-1-OXIDANYLETHYL]PHOSPHINI