Analysis of Ligand-Protein Contacts in PDB entry:
2VRQ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 13 ligands in PDB entry 2VRQ. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
XYP
D
1 10BETA-D-XYLOPYRANOSE
lig 2
XYP
D
2 9BETA-D-XYLOPYRANOSE
lig 3
AHR
D
3 9ALPHA-L-ARABINOFURANOSE
lig 4
XYP
D
4 9BETA-D-XYLOPYRANOSE
lig 5
XYP
E
1 10BETA-D-XYLOPYRANOSE
lig 6
XYP
E
2 9BETA-D-XYLOPYRANOSE
lig 7
AHR
E
3 9ALPHA-L-ARABINOFURANOSE
lig 8
XYP
E
4 9BETA-D-XYLOPYRANOSE
lig 9
XYP
F
1 10BETA-D-XYLOPYRANOSE
lig 10
XYP
F
2 9BETA-D-XYLOPYRANOSE
lig 11
AHR
F
3 9ALPHA-L-ARABINOFURANOSE
lig 12
PO4
A
505 5PHOSPHATE ION
lig 13
PO4
C
501 5PHOSPHATE ION