Analysis of Ligand-Protein Contacts in PDB entry:
2VT0


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 19 ligands in PDB entry 2VT0. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
MAN
C
3 11ALPHA-D-MANNOPYRANOSE
lig 4
FUC
C
4 10ALPHA-L-FUCOPYRANOSE
lig 5
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
FUC
D
2 10ALPHA-L-FUCOPYRANOSE
lig 7
NAG
D
3 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
CBU
A
1499 11(1R,2R,3S,4S,5S,6S)-CYCLOHEXANE-1,2,3,4,5,
lig 9
SO4
A
1503 5SULFATE ION
lig 10
SO4
A
1504 5SULFATE ION
lig 11
SO4
A
1505 5SULFATE ION
lig 12
SO4
A
1506 5SULFATE ION
lig 13
SO4
A
1507 5SULFATE ION
lig 14
SO4
A
1508 5SULFATE ION
lig 15
CBU
B
1497 11(1R,2R,3S,4S,5S,6S)-CYCLOHEXANE-1,2,3,4,5,
lig 16
SO4
B
1500 5SULFATE ION
lig 17
SO4
B
1501 5SULFATE ION
lig 18
SO4
B
1502 5SULFATE ION
lig 19
SO4
B
1503 5SULFATE ION