Analysis of Ligand-Protein Contacts in PDB entry:
2VYV


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 27 ligands in PDB entry 2VYV. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
CSD
A
148 83-SULFINOALANINE
lig 2
CSD
A
287 83-SULFINOALANINE
lig 3
CSD
B
148 83-SULFINOALANINE
lig 4
CSD
B
287 83-SULFINOALANINE
lig 5
CSD
C
148 83-SULFINOALANINE
lig 6
CSD
C
287 83-SULFINOALANINE
lig 7
CSX
D
75 7S-OXY CYSTEINE
lig 8
CSD
D
149 83-SULFINOALANINE
lig 9
FMT
A
1330 3FORMIC ACID
lig 10
FMT
A
1331 3FORMIC ACID
lig 11
FMT
A
1332 3FORMIC ACID
lig 12
NAD
A
1333 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 13
FMT
B
1330 3FORMIC ACID
lig 14
FMT
B
1331 3FORMIC ACID
lig 15
FMT
B
1332 3FORMIC ACID
lig 16
FMT
B
1333 3FORMIC ACID
lig 17
NAD
B
1334 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 18
FMT
C
1330 3FORMIC ACID
lig 19
FMT
C
1331 3FORMIC ACID
lig 20
NAD
C
1332 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 21
1GP
D
1334 10SN-GLYCEROL-1-PHOSPHATE
lig 22
FMT
D
1335 3FORMIC ACID
lig 23
FMT
D
1336 3FORMIC ACID
lig 24
FMT
D
1337 3FORMIC ACID
lig 25
FMT
D
1338 3FORMIC ACID
lig 26
FMT
D
1339 3FORMIC ACID
lig 27
NAD
D
1340 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE