Analysis of Ligand-Protein Contacts in PDB entry:
2WDR


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 24 ligands in PDB entry 2WDR. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
FAD
A
601 53FLAVIN-ADENINE DINUCLEOTIDE
lig 2
TEO
A
1589 9MALATE LIKE INTERMEDIATE
lig 3
NA
A
1590 1SODIUM ION
lig 4
FES
B
302 4FE2/S2 (INORGANIC) CLUSTER
lig 5
SF4
B
303 8IRON/SULFUR CLUSTER
lig 6
F3S
B
304 7FE3-S4 CLUSTER
lig 7
HEM
C
1130 43PROTOPORPHYRIN IX CONTAINING FE
lig 8
PCI
C
1131 12PENTACHLOROPHENOL
lig 9
FAD
E
601 53FLAVIN-ADENINE DINUCLEOTIDE
lig 10
TEO
E
1589 9MALATE LIKE INTERMEDIATE
lig 11
NA
E
1590 1SODIUM ION
lig 12
FES
F
302 4FE2/S2 (INORGANIC) CLUSTER
lig 13
SF4
F
303 8IRON/SULFUR CLUSTER
lig 14
F3S
F
304 7FE3-S4 CLUSTER
lig 15
HEM
G
1130 43PROTOPORPHYRIN IX CONTAINING FE
lig 16
PCI
G
1131 12PENTACHLOROPHENOL
lig 17
FAD
I
601 53FLAVIN-ADENINE DINUCLEOTIDE
lig 18
TEO
I
1589 9MALATE LIKE INTERMEDIATE
lig 19
NA
I
1590 1SODIUM ION
lig 20
FES
J
302 4FE2/S2 (INORGANIC) CLUSTER
lig 21
SF4
J
303 8IRON/SULFUR CLUSTER
lig 22
F3S
J
304 7FE3-S4 CLUSTER
lig 23
HEM
K
1130 43PROTOPORPHYRIN IX CONTAINING FE
lig 24
PCI
K
1131 12PENTACHLOROPHENOL