Analysis of Ligand-Protein Contacts in PDB entry:
2XYD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 28 ligands in PDB entry 2XYD. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
FUC
C
2 10ALPHA-L-FUCOPYRANOSE
lig 3
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 8
FUC
E
4 10ALPHA-L-FUCOPYRANOSE
lig 9
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
FUC
F
2 10ALPHA-L-FUCOPYRANOSE
lig 11
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
BMA
H
3 11BETA-D-MANNOPYRANOSE
lig 16
3ES
A
1611 51 METHYL]-1-OXO-PROPYL}AMINO)-3-(4-HYDROXY-
lig 17
ZN
A
1620 1ZINC ION
lig 18
CL
A
1621 1CHLORIDE ION
lig 19
PEG
A
1622 7DI(HYDROXYETHYL)ETHER
lig 20
PEG
A
1623 7DI(HYDROXYETHYL)ETHER
lig 21
PEG
A
1624 7DI(HYDROXYETHYL)ETHER
lig 22
PG4
A
1625 10TETRAETHYLENE GLYCOL
lig 23
3ES
B
1611 51 METHYL]-1-OXO-PROPYL}AMINO)-3-(4-HYDROXY-
lig 24
ZN
B
1619 1ZINC ION
lig 25
CL
B
1620 1CHLORIDE ION
lig 26
PG4
B
1621 13TETRAETHYLENE GLYCOL
lig 27
P6G
B
1622 19HEXAETHYLENE GLYCOL
lig 28
PEG
B
1623 7DI(HYDROXYETHYL)ETHER