Analysis of Ligand-Protein Contacts in PDB entry:
2Y5M


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 51 ligands in PDB entry 2Y5M. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
FVA
A
1 9N-FORMYL-L-VALINE
lig 2
DLE
A
4 8D-LEUCINE
lig 3
DVA
A
6 7D-VALINE
lig 4
DVA
A
8 7D-VALINE
lig 5
DLE
A
10 8D-LEUCINE
lig 6
DLE
A
12 8D-LEUCINE
lig 7
DLE
A
14 8D-LEUCINE
lig 8
ETA
A
16 4ETHANOLAMINE
lig 9
FVA
B
1 9N-FORMYL-L-VALINE
lig 10
DLE
B
4 8D-LEUCINE
lig 11
DVA
B
6 7D-VALINE
lig 12
DVA
B
8 7D-VALINE
lig 13
DLE
B
10 8D-LEUCINE
lig 14
DLE
B
12 8D-LEUCINE
lig 15
DLE
B
14 8D-LEUCINE
lig 16
ETA
B
16 4ETHANOLAMINE
lig 17
FVA
C
1 9N-FORMYL-L-VALINE
lig 18
DLE
C
4 8D-LEUCINE
lig 19
DVA
C
6 7D-VALINE
lig 20
DVA
C
8 7D-VALINE
lig 21
DLE
C
10 8D-LEUCINE
lig 22
DLE
C
12 8D-LEUCINE
lig 23
DLE
C
14 8D-LEUCINE
lig 24
ETA
C
16 4ETHANOLAMINE
lig 25
FVA
D
1 9N-FORMYL-L-VALINE
lig 26
DLE
D
4 8D-LEUCINE
lig 27
DVA
D
6 7D-VALINE
lig 28
DVA
D
8 7D-VALINE
lig 29
DLE
D
10 8D-LEUCINE
lig 30
DLE
D
12 8D-LEUCINE
lig 31
DLE
D
14 8D-LEUCINE
lig 32
ETA
D
16 4ETHANOLAMINE
lig 33
FVA
E
1 9N-FORMYL-L-VALINE
lig 34
DLE
E
4 8D-LEUCINE
lig 35
DVA
E
6 7D-VALINE
lig 36
DVA
E
8 7D-VALINE
lig 37
DLE
E
10 8D-LEUCINE
lig 38
DLE
E
12 8D-LEUCINE
lig 39
DLE
E
14 8D-LEUCINE
lig 40
ETA
E
16 4ETHANOLAMINE
lig 41
FVA
F
1 9N-FORMYL-L-VALINE
lig 42
DLE
F
4 8D-LEUCINE
lig 43
DVA
F
6 7D-VALINE
lig 44
DVA
F
8 7D-VALINE
lig 45
DLE
F
10 8D-LEUCINE
lig 46
DLE
F
12 8D-LEUCINE
lig 47
DLE
F
14 8D-LEUCINE
lig 48
ETA
F
16 4ETHANOLAMINE
lig 49
15P
A
1001 48POLYETHYLENE GLYCOL (N=34)
lig 50
15P
A
1002 21POLYETHYLENE GLYCOL (N=34)
lig 51
15P
A
1003 22POLYETHYLENE GLYCOL (N=34)