Analysis of Ligand-Protein Contacts in PDB entry:
2YAP


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 19 ligands in PDB entry 2YAP. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
CU
A
1463 1COPPER (II) ION
lig 2
CU
A
1464 1COPPER (II) ION
lig 3
CU
A
1465 1COPPER (II) ION
lig 4
MPD
A
1466 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 5
MRD
A
1467 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 6
MRD
A
1468 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 7
MRD
A
1469 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 8
MPD
A
1470 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 9
MRD
A
1471 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 10
MPD
A
1472 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 11
MRD
A
1473 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 12
MPD
A
1474 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 13
MPD
A
1475 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 14
MPD
A
1476 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 15
MPD
A
1477 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 16
MRD
A
1478 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 17
MPD
A
1479 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 18
MRD
A
1480 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 19
MRD
A
1481 8(4R)-2-METHYLPENTANE-2,4-DIOL