Analysis of Ligand-Protein Contacts in PDB entry:
2YEQ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 87 ligands in PDB entry 2YEQ. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
PE5
A
529 133,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL
lig 2
PE5
A
530 73,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL
lig 3
PE5
A
531 63,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL
lig 4
EDO
A
532 41,2-ETHANEDIOL
lig 5
EDO
A
533 41,2-ETHANEDIOL
lig 6
PE5
A
534 163,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL
lig 7
EDO
A
535 41,2-ETHANEDIOL
lig 8
PE5
A
536 63,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL
lig 9
EDO
A
537 41,2-ETHANEDIOL
lig 10
EDO
A
539 41,2-ETHANEDIOL
lig 11
EDO
A
540 41,2-ETHANEDIOL
lig 12
EDO
A
541 41,2-ETHANEDIOL
lig 13
EDO
A
545 41,2-ETHANEDIOL
lig 14
PE5
A
546 83,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL
lig 15
EDO
A
548 41,2-ETHANEDIOL
lig 16
EDO
A
549 41,2-ETHANEDIOL
lig 17
EDO
A
550 41,2-ETHANEDIOL
lig 18
EDO
A
551 41,2-ETHANEDIOL
lig 19
EDO
A
552 41,2-ETHANEDIOL
lig 20
PE5
A
553 73,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL
lig 21
PE5
A
554 43,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL
lig 22
PE5
A
555 63,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL
lig 23
PE5
A
557 73,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL
lig 24
PE5
A
558 73,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL
lig 25
EDO
A
560 41,2-ETHANEDIOL
lig 26
EDO
A
561 41,2-ETHANEDIOL
lig 27
EDO
A
562 41,2-ETHANEDIOL
lig 28
EDO
A
564 41,2-ETHANEDIOL
lig 29
EDO
A
565 41,2-ETHANEDIOL
lig 30
EDO
A
566 41,2-ETHANEDIOL
lig 31
EDO
A
569 41,2-ETHANEDIOL
lig 32
PE5
A
575 123,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL
lig 33
EDO
A
576 41,2-ETHANEDIOL
lig 34
NA
A
577 1SODIUM ION
lig 35
EDO
A
579 41,2-ETHANEDIOL
lig 36
PE5
A
580 73,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL
lig 37
PE5
A
581 73,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL
lig 38
NA
A
582 1SODIUM ION
lig 39
FE
A
1524 1FE (III) ION
lig 40
CA
A
1525 1CALCIUM ION
lig 41
CA
A
1526 1CALCIUM ION
lig 42
PO4
A
1527 5PHOSPHATE ION
lig 43
NA
A
1585 1SODIUM ION
lig 44
PE5
B
529 133,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL
lig 45
PE5
B
530 73,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL
lig 46
PE5
B
531 63,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL
lig 47
EDO
B
532 41,2-ETHANEDIOL
lig 48
EDO
B
533 41,2-ETHANEDIOL
lig 49
PE5
B
534 163,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL
lig 50
EDO
B
535 41,2-ETHANEDIOL
lig 51
PE5
B
536 63,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL
lig 52
EDO
B
537 41,2-ETHANEDIOL
lig 53
PE5
B
538 153,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL
lig 54
EDO
B
540 41,2-ETHANEDIOL
lig 55
EDO
B
541 41,2-ETHANEDIOL
lig 56
EDO
B
545 41,2-ETHANEDIOL
lig 57
PE5
B
546 83,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL
lig 58
EDO
B
548 41,2-ETHANEDIOL
lig 59
EDO
B
549 41,2-ETHANEDIOL
lig 60
EDO
B
550 41,2-ETHANEDIOL
lig 61
EDO
B
551 41,2-ETHANEDIOL
lig 62
EDO
B
552 41,2-ETHANEDIOL
lig 63
PE5
B
553 73,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL
lig 64
PE5
B
554 43,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL
lig 65
PE5
B
555 63,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL
lig 66
PE5
B
556 73,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL
lig 67
PE5
B
557 73,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL
lig 68
PE5
B
558 73,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL
lig 69
EDO
B
560 41,2-ETHANEDIOL
lig 70
EDO
B
561 41,2-ETHANEDIOL
lig 71
EDO
B
562 41,2-ETHANEDIOL
lig 72
EDO
B
565 41,2-ETHANEDIOL
lig 73
EDO
B
566 41,2-ETHANEDIOL
lig 74
PE5
B
568 83,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL
lig 75
EDO
B
569 41,2-ETHANEDIOL
lig 76
EDO
B
573 41,2-ETHANEDIOL
lig 77
EDO
B
576 41,2-ETHANEDIOL
lig 78
NA
B
577 1SODIUM ION
lig 79
EDO
B
579 41,2-ETHANEDIOL
lig 80
PE5
B
580 73,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL
lig 81
PE5
B
581 73,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL
lig 82
NA
B
582 1SODIUM ION
lig 83
FE
B
1524 1FE (III) ION
lig 84
CA
B
1525 1CALCIUM ION
lig 85
CA
B
1526 1CALCIUM ION
lig 86
PO4
B
1527 5PHOSPHATE ION
lig 87
NA
B
1585 1SODIUM ION