Analysis of Ligand-Protein Contacts in PDB entry:
2YFD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 11 ligands in PDB entry 2YFD. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
MG
A
1146 1MAGNESIUM ION
lig 2
UMP
A
1147 202'-DEOXYURIDINE 5'-MONOPHOSPHATE
lig 3
CL
A
1148 1CHLORIDE ION
lig 4
MG
B
1145 1MAGNESIUM ION
lig 5
ACT
B
1146 4ACETATE ION
lig 6
MG
C
1144 1MAGNESIUM ION
lig 7
UMP
C
1145 202'-DEOXYURIDINE 5'-MONOPHOSPHATE
lig 8
MG
D
1145 1MAGNESIUM ION
lig 9
CL
D
1146 1CHLORIDE ION
lig 10
GOL
D
1147 6GLYCEROL
lig 11
ACT
D
1148 4ACETATE ION