Analysis of Ligand-Protein Contacts in PDB entry:
2YFR


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 23 ligands in PDB entry 2YFR. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
CA
A
1709 1CALCIUM ION
lig 2
CL
A
1710 1CHLORIDE ION
lig 3
ACT
A
1711 4ACETATE ION
lig 4
ACT
A
1712 4ACETATE ION
lig 5
ACT
A
1713 4ACETATE ION
lig 6
SO4
A
1714 5SULFATE ION
lig 7
SO4
A
1715 5SULFATE ION
lig 8
SO4
A
1716 5SULFATE ION
lig 9
SO4
A
1717 5SULFATE ION
lig 10
SO4
A
1718 5SULFATE ION
lig 11
SO4
A
1719 5SULFATE ION
lig 12
SO4
A
1720 5SULFATE ION
lig 13
SO4
A
1721 5SULFATE ION
lig 14
SO4
A
1722 5SULFATE ION
lig 15
GOL
A
1723 6GLYCEROL
lig 16
GOL
A
1724 6GLYCEROL
lig 17
GOL
A
1725 6GLYCEROL
lig 18
GOL
A
1726 6GLYCEROL
lig 19
GOL
A
1727 6GLYCEROL
lig 20
GOL
A
1728 6GLYCEROL
lig 21
GOL
A
1729 6GLYCEROL
lig 22
GOL
A
1730 6GLYCEROL
lig 23
GOL
A
1731 6GLYCEROL