Analysis of Ligand-Protein Contacts in PDB entry:
2YFS


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 10 ligands in PDB entry 2YFS. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
GLC
B
1 11ALPHA-D-GLUCOPYRANOSE
lig 2
FRU
B
2 12BETA-D-FRUCTOFURANOSE
lig 3
GLC
C
1 11ALPHA-D-GLUCOPYRANOSE
lig 4
FRU
C
2 12BETA-D-FRUCTOFURANOSE
lig 5
CA
A
1711 1CALCIUM ION
lig 6
CA
A
1712 1CALCIUM ION
lig 7
SO4
A
1713 5SULFATE ION
lig 8
SO4
A
1714 5SULFATE ION
lig 9
SO4
A
1715 5SULFATE ION
lig 10
SO4
A
1716 5SULFATE ION