Analysis of Ligand-Protein Contacts in PDB entry:
2YGP


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 10 ligands in PDB entry 2YGP. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
MLY
A
62 11N-DIMETHYL-LYSINE
lig 2
MLY
A
72 11N-DIMETHYL-LYSINE
lig 3
MLY
A
111 11N-DIMETHYL-LYSINE
lig 4
MLY
A
130 11N-DIMETHYL-LYSINE
lig 5
MLY
A
143 11N-DIMETHYL-LYSINE
lig 6
MLY
A
166 11N-DIMETHYL-LYSINE
lig 7
PCF
A
1213 501,2-DIACYL-SN-GLYCERO-3-PHOSHOCHOLINE
lig 8
NAG
A
1214 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
CA
A
1215 1CALCIUM ION
lig 10
SPD
A
1216 10SPERMIDINE