Analysis of Ligand-Protein Contacts in PDB entry:
2YJ1


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 14 ligands in PDB entry 2YJ1. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
HT7
B
86 15(3S)-3-AMINO-4-(1H-INDOL-3-YL)BUTANOIC ACI
lig 2
B3E
B
89 10(3S)-3-AMINOHEXANEDIOIC ACID
lig 3
B3Q
B
93 10(3S)-3,6-DIAMINO-6-OXOHEXANOIC ACID
lig 4
HR7
B
96 12(3S)-3-AMINO-6-[(DIAMINOMETHYLIDENE)AMINO]
lig 5
B3D
B
100 93-AMINOPENTANEDIOIC ACID
lig 6
B3A
B
103 6(3S)-3-AMINOBUTANOIC ACID
lig 7
NH2
B
107 1AMINO GROUP
lig 8
ACE
D
85 1ACETYL GROUP
lig 9
HT7
D
86 15(3S)-3-AMINO-4-(1H-INDOL-3-YL)BUTANOIC ACI
lig 10
B3E
D
89 10(3S)-3-AMINOHEXANEDIOIC ACID
lig 11
B3Q
D
93 10(3S)-3,6-DIAMINO-6-OXOHEXANOIC ACID
lig 12
HR7
D
96 12(3S)-3-AMINO-6-[(DIAMINOMETHYLIDENE)AMINO]
lig 13
B3D
D
100 93-AMINOPENTANEDIOIC ACID
lig 14
B3A
D
103 6(3S)-3-AMINOBUTANOIC ACID