Analysis of Ligand-Protein Contacts in PDB entry:
2YJD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 10 ligands in PDB entry 2YJD. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
ACE
C
0 3ACETYL GROUP
lig 2
MK8
C
2 92-METHYL-L-NORLEUCINE
lig 3
MK8
C
6 92-METHYL-L-NORLEUCINE
lig 4
NH2
C
12 1AMINO GROUP
lig 5
ACE
D
0 3ACETYL GROUP
lig 6
MK8
D
2 92-METHYL-L-NORLEUCINE
lig 7
MK8
D
6 92-METHYL-L-NORLEUCINE
lig 8
NH2
D
12 1AMINO GROUP
lig 9
YJD
A
1498 204-(2-PROPAN-2-YLOXYBENZIMIDAZOL-1-YL)PHENO
lig 10
YJD
B
1498 204-(2-PROPAN-2-YLOXYBENZIMIDAZOL-1-YL)PHENO