Analysis of Ligand-Protein Contacts in PDB entry:
2YOA


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 14 ligands in PDB entry 2YOA. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
CA
A
1001 1CALCIUM ION
lig 2
CA
A
1002 1CALCIUM ION
lig 3
CA
A
1003 1CALCIUM ION
lig 4
SEP
A
1004 11PHOSPHOSERINE
lig 5
CA
A
1005 1CALCIUM ION
lig 6
SCN
A
1006 3THIOCYANATE ION
lig 7
SCN
A
1007 3THIOCYANATE ION
lig 8
CA
B
1001 1CALCIUM ION
lig 9
CA
B
1002 1CALCIUM ION
lig 10
CA
B
1003 1CALCIUM ION
lig 11
SEP
B
1004 11PHOSPHOSERINE
lig 12
SCN
B
1007 3THIOCYANATE ION
lig 13
SCN
B
1008 3THIOCYANATE ION
lig 14
SCN
B
1009 3THIOCYANATE ION