Analysis of Ligand-Protein Contacts in PDB entry:
2YP5


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 16 ligands in PDB entry 2YP5. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
MAN
B
3 11ALPHA-D-MANNOPYRANOSE
lig 4
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
GAL
D
1 2BETA-D-GALACTOPYRANOSE
lig 7
SIA
D
2 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 8
NAG
A
801 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
A
802 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
A
803 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
A
809 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
A
810 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
EPE
A
811 154-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULF
lig 14
EPE
A
812 154-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULF
lig 15
EPE
A
813 154-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULF
lig 16
TAM
A
816 11TRIS(HYDROXYETHYL)AMINOMETHANE