Analysis of Ligand-Protein Contacts in PDB entry:
2YPD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 13 ligands in PDB entry 2YPD. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
EMT
A
3498 22-(ETHYLMERCURI-THIO)-BENZOIC ACID
lig 2
EMT
A
3499 22-(ETHYLMERCURI-THIO)-BENZOIC ACID
lig 3
EMT
A
3500 22-(ETHYLMERCURI-THIO)-BENZOIC ACID
lig 4
EMT
A
3501 22-(ETHYLMERCURI-THIO)-BENZOIC ACID
lig 5
EMT
A
3502 22-(ETHYLMERCURI-THIO)-BENZOIC ACID
lig 6
EMT
A
3503 22-(ETHYLMERCURI-THIO)-BENZOIC ACID
lig 7
NA
A
3504 1SODIUM ION
lig 8
EMT
B
3498 22-(ETHYLMERCURI-THIO)-BENZOIC ACID
lig 9
EMT
B
3499 22-(ETHYLMERCURI-THIO)-BENZOIC ACID
lig 10
EMT
B
3500 22-(ETHYLMERCURI-THIO)-BENZOIC ACID
lig 11
EMT
B
3501 22-(ETHYLMERCURI-THIO)-BENZOIC ACID
lig 12
EMT
B
3502 22-(ETHYLMERCURI-THIO)-BENZOIC ACID
lig 13
NA
B
3503 1SODIUM ION