Analysis of Ligand-Protein Contacts in PDB entry:
2YXT


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 22 ligands in PDB entry 2YXT. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NA
A
1314 1SODIUM ION
lig 2
PO4
A
1319 5PHOSPHATE ION
lig 3
MPD
A
1001 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 4
MPD
A
1003 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 5
MPD
A
1005 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 6
MPD
A
1009 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 7
MPD
A
1013 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 8
NA
B
1316 1SODIUM ION
lig 9
PO4
B
1329 5PHOSPHATE ION
lig 10
PO4
B
1335 5PHOSPHATE ION
lig 11
PO4
B
1337 5PHOSPHATE ION
lig 12
PO4
B
1347 5PHOSPHATE ION
lig 13
PO4
B
1349 5PHOSPHATE ION
lig 14
MPD
B
1023 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 15
MPD
B
1025 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 16
MPD
B
1027 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 17
MPD
B
1031 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 18
MPD
B
1033 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 19
MPD
B
1039 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 20
MPD
B
1041 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 21
MPD
B
1045 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 22
MPD
B
1053 8(4S)-2-METHYL-2,4-PENTANEDIOL