Analysis of Ligand-Protein Contacts in PDB entry:
36CV

Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.

There are 164 ligands in PDB entry 36CV. Click on ligand of interest for LPC analysis.

	HET ID	Chain ID	Residue N	Number of atoms	Ligand name
lig 1	FME	A	1	10	N-FORMYLMETHIONINE
lig 2	FME	B	1	10	N-FORMYLMETHIONINE
lig 3	TPO	G	11	11	PHOSPHOTHREONINE
lig 4	FME	N	1	10	N-FORMYLMETHIONINE
lig 5	FME	O	1	10	N-FORMYLMETHIONINE
lig 6	TPO	T	11	11	PHOSPHOTHREONINE
lig 7	CU	A	601	1	COPPER (II) ION
lig 8	MG	A	602	1	MAGNESIUM ION
lig 9	NA	A	603	1	SODIUM ION
lig 10	PGV	A	604	51	OCTADEC-11-ENOATE
lig 11	HEA	A	605	60	HEME-A
lig 12	HEA	A	606	60	HEME-A
lig 13	EDO	A	607	4	1,2-ETHANEDIOL
lig 14	EDO	A	608	4	1,2-ETHANEDIOL
lig 15	EDO	A	609	4	1,2-ETHANEDIOL
lig 16	EDO	A	610	4	1,2-ETHANEDIOL
lig 17	EDO	A	611	4	1,2-ETHANEDIOL
lig 18	EDO	A	612	4	1,2-ETHANEDIOL
lig 19	0NM	A	613	3	CYANIC ACID
lig 20	0NM	A	614	3	CYANIC ACID
lig 21	0NM	A	615	3	CYANIC ACID
lig 22	EDO	A	616	4	1,2-ETHANEDIOL
lig 23	EDO	A	617	4	1,2-ETHANEDIOL
lig 24	EDO	A	618	4	1,2-ETHANEDIOL
lig 25	CUA	B	301	2	DINUCLEAR COPPER ION
lig 26	PSC	B	302	52	17,20-DIEN-1-AMINIUM 4-OXIDE
lig 27	CHD	B	303	29	CHOLIC ACID
lig 28	EDO	B	304	4	1,2-ETHANEDIOL
lig 29	EDO	B	305	4	1,2-ETHANEDIOL
lig 30	EDO	B	306	4	1,2-ETHANEDIOL
lig 31	EDO	B	307	4	1,2-ETHANEDIOL
lig 32	EDO	B	308	4	1,2-ETHANEDIOL
lig 33	EDO	B	309	4	1,2-ETHANEDIOL
lig 34	EDO	B	310	4	1,2-ETHANEDIOL
lig 35	EDO	B	311	4	1,2-ETHANEDIOL
lig 36	EDO	B	312	4	1,2-ETHANEDIOL
lig 37	CHD	C	301	29	CHOLIC ACID
lig 38	PEK	C	302	53	11,14-TETRAENOATE
lig 39	PEK	C	303	53	11,14-TETRAENOATE
lig 40	PGV	C	304	51	OCTADEC-11-ENOATE
lig 41	PGV	C	305	51	OCTADEC-11-ENOATE
lig 42	CDL	C	306	100	CARDIOLIPIN
lig 43	CHD	C	307	29	CHOLIC ACID
lig 44	EDO	C	308	4	1,2-ETHANEDIOL
lig 45	EDO	C	309	4	1,2-ETHANEDIOL
lig 46	EDO	C	310	4	1,2-ETHANEDIOL
lig 47	EDO	C	311	4	1,2-ETHANEDIOL
lig 48	0NM	C	312	3	CYANIC ACID
lig 49	CDL	C	313	100	CARDIOLIPIN
lig 50	EDO	C	314	4	1,2-ETHANEDIOL
lig 51	EDO	C	315	4	1,2-ETHANEDIOL
lig 52	DMU	C	316	33	DECYL-BETA-D-MALTOPYRANOSIDE
lig 53	PEK	C	317	53	11,14-TETRAENOATE
lig 54	TGL	D	201	63	TRISTEAROYLGLYCEROL
lig 55	EDO	D	202	4	1,2-ETHANEDIOL
lig 56	EDO	D	203	4	1,2-ETHANEDIOL
lig 57	EDO	D	204	4	1,2-ETHANEDIOL
lig 58	EDO	D	205	4	1,2-ETHANEDIOL
lig 59	EDO	E	201	4	1,2-ETHANEDIOL
lig 60	EDO	E	202	4	1,2-ETHANEDIOL
lig 61	EDO	E	203	4	1,2-ETHANEDIOL
lig 62	EDO	E	204	4	1,2-ETHANEDIOL
lig 63	EDO	F	701	4	1,2-ETHANEDIOL
lig 64	EDO	F	702	4	1,2-ETHANEDIOL
lig 65	ZN	F	703	1	ZINC ION
lig 66	EDO	F	704	4	1,2-ETHANEDIOL
lig 67	EDO	F	705	4	1,2-ETHANEDIOL
lig 68	EDO	F	706	4	1,2-ETHANEDIOL
lig 69	EDO	F	707	4	1,2-ETHANEDIOL
lig 70	EDO	F	708	4	1,2-ETHANEDIOL
lig 71	EDO	F	709	4	1,2-ETHANEDIOL
lig 72	DMU	G	101	33	DECYL-BETA-D-MALTOPYRANOSIDE
lig 73	EDO	G	102	4	1,2-ETHANEDIOL
lig 74	EDO	G	103	4	1,2-ETHANEDIOL
lig 75	EDO	G	104	4	1,2-ETHANEDIOL
lig 76	DMU	G	105	33	DECYL-BETA-D-MALTOPYRANOSIDE
lig 77	CHD	G	106	29	CHOLIC ACID
lig 78	EDO	G	107	4	1,2-ETHANEDIOL
lig 79	TGL	I	101	63	TRISTEAROYLGLYCEROL
lig 80	SAC	I	102	9	N-ACETYL-SERINE
lig 81	EDO	I	103	4	1,2-ETHANEDIOL
lig 82	CHD	J	101	29	CHOLIC ACID
lig 83	EDO	J	102	4	1,2-ETHANEDIOL
lig 84	EDO	J	103	4	1,2-ETHANEDIOL
lig 85	EDO	K	201	4	1,2-ETHANEDIOL
lig 86	EDO	L	501	4	1,2-ETHANEDIOL
lig 87	TGL	L	502	63	TRISTEAROYLGLYCEROL
lig 88	EDO	L	503	4	1,2-ETHANEDIOL
lig 89	EDO	L	504	4	1,2-ETHANEDIOL
lig 90	EDO	L	505	4	1,2-ETHANEDIOL
lig 91	PGV	M	101	51	OCTADEC-11-ENOATE
lig 92	EDO	M	102	4	1,2-ETHANEDIOL
lig 93	DMU	M	103	33	DECYL-BETA-D-MALTOPYRANOSIDE
lig 94	CU	N	601	1	COPPER (II) ION
lig 95	MG	N	602	1	MAGNESIUM ION
lig 96	NA	N	603	1	SODIUM ION
lig 97	TGL	N	604	63	TRISTEAROYLGLYCEROL
lig 98	HEA	N	605	60	HEME-A
lig 99	HEA	N	606	60	HEME-A
lig 100	EDO	N	607	4	1,2-ETHANEDIOL
lig 101	EDO	N	608	4	1,2-ETHANEDIOL
lig 102	EDO	N	609	4	1,2-ETHANEDIOL
lig 103	EDO	N	610	4	1,2-ETHANEDIOL
lig 104	EDO	N	611	4	1,2-ETHANEDIOL
lig 105	EDO	N	612	4	1,2-ETHANEDIOL
lig 106	EDO	N	613	4	1,2-ETHANEDIOL
lig 107	EDO	N	614	4	1,2-ETHANEDIOL
lig 108	0NM	N	615	3	CYANIC ACID
lig 109	0NM	N	616	3	CYANIC ACID
lig 110	0NM	N	617	3	CYANIC ACID
lig 111	0NM	N	618	3	CYANIC ACID
lig 112	0NM	N	619	3	CYANIC ACID
lig 113	EDO	N	620	4	1,2-ETHANEDIOL
lig 114	EDO	N	621	4	1,2-ETHANEDIOL
lig 115	TGL	N	622	63	TRISTEAROYLGLYCEROL
lig 116	EDO	N	623	4	1,2-ETHANEDIOL
lig 117	EDO	N	624	4	1,2-ETHANEDIOL
lig 118	EDO	N	625	4	1,2-ETHANEDIOL
lig 119	EDO	N	626	4	1,2-ETHANEDIOL
lig 120	CUA	O	301	2	DINUCLEAR COPPER ION
lig 121	PSC	O	302	52	17,20-DIEN-1-AMINIUM 4-OXIDE
lig 122	EDO	O	303	4	1,2-ETHANEDIOL
lig 123	EDO	O	304	4	1,2-ETHANEDIOL
lig 124	PEK	P	301	53	11,14-TETRAENOATE
lig 125	PGV	P	302	51	OCTADEC-11-ENOATE
lig 126	CHD	P	303	29	CHOLIC ACID
lig 127	PEK	P	304	53	11,14-TETRAENOATE
lig 128	PEK	P	305	53	11,14-TETRAENOATE
lig 129	PGV	P	306	51	OCTADEC-11-ENOATE
lig 130	PGV	P	307	51	OCTADEC-11-ENOATE
lig 131	CDL	P	308	100	CARDIOLIPIN
lig 132	CHD	P	309	29	CHOLIC ACID
lig 133	EDO	P	310	4	1,2-ETHANEDIOL
lig 134	EDO	P	311	4	1,2-ETHANEDIOL
lig 135	CDL	P	312	100	CARDIOLIPIN
lig 136	EDO	P	313	4	1,2-ETHANEDIOL
lig 137	DMU	P	314	33	DECYL-BETA-D-MALTOPYRANOSIDE
lig 138	EDO	Q	1801	4	1,2-ETHANEDIOL
lig 139	EDO	Q	1802	4	1,2-ETHANEDIOL
lig 140	EDO	Q	1803	4	1,2-ETHANEDIOL
lig 141	EDO	R	201	4	1,2-ETHANEDIOL
lig 142	EDO	R	202	4	1,2-ETHANEDIOL
lig 143	EDO	S	1601	4	1,2-ETHANEDIOL
lig 144	ZN	S	1602	1	ZINC ION
lig 145	EDO	S	1603	4	1,2-ETHANEDIOL
lig 146	EDO	S	1604	4	1,2-ETHANEDIOL
lig 147	EDO	S	1605	4	1,2-ETHANEDIOL
lig 148	EDO	S	1606	4	1,2-ETHANEDIOL
lig 149	EDO	S	1607	4	1,2-ETHANEDIOL
lig 150	EDO	T	1301	4	1,2-ETHANEDIOL
lig 151	CHD	T	1302	29	CHOLIC ACID
lig 152	EDO	T	1303	4	1,2-ETHANEDIOL
lig 153	SAC	V	101	9	N-ACETYL-SERINE
lig 154	EDO	V	102	4	1,2-ETHANEDIOL
lig 155	EDO	V	103	4	1,2-ETHANEDIOL
lig 156	EDO	W	301	4	1,2-ETHANEDIOL
lig 157	CHD	W	302	29	CHOLIC ACID
lig 158	EDO	W	303	4	1,2-ETHANEDIOL
lig 159	EDO	W	304	4	1,2-ETHANEDIOL
lig 160	TGL	Y	101	63	TRISTEAROYLGLYCEROL
lig 161	EDO	Y	102	4	1,2-ETHANEDIOL
lig 162	CHD	Y	103	29	CHOLIC ACID
lig 163	PGV	Z	101	51	OCTADEC-11-ENOATE
lig 164	DMU	Z	102	33	DECYL-BETA-D-MALTOPYRANOSIDE

Analysis of Ligand-Protein Contacts in PDB entry: 36CV

Analysis of Ligand-Protein Contacts in PDB entry:
36CV