Analysis of Ligand-Protein Contacts in PDB entry:
3BVT


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 8 ligands in PDB entry 3BVT. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
Z4R
B
1 13METHYL 3-THIO-ALPHA-D-MANNOPYRANOSIDE
lig 2
MAN
B
2 11ALPHA-D-MANNOPYRANOSE
lig 3
NAG
A
1046 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
PO4
A
1047 5PHOSPHATE ION
lig 5
ZN
A
1048 1ZINC ION
lig 6
MRD
A
1049 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 7
MPD
A
1051 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 8
MPD
A
1052 8(4S)-2-METHYL-2,4-PENTANEDIOL