Analysis of Ligand-Protein Contacts in PDB entry:
3D4K


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 24 ligands in PDB entry 3D4K. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
H1M
E
1 15 MANNOPYRANOSIDE
lig 2
MAN
E
2 11ALPHA-D-MANNOPYRANOSE
lig 3
MAN
E
3 11ALPHA-D-MANNOPYRANOSE
lig 4
H1M
F
1 15 MANNOPYRANOSIDE
lig 5
MAN
F
2 11ALPHA-D-MANNOPYRANOSE
lig 6
MAN
F
3 11ALPHA-D-MANNOPYRANOSE
lig 7
H1M
G
1 15 MANNOPYRANOSIDE
lig 8
MAN
G
2 11ALPHA-D-MANNOPYRANOSE
lig 9
MAN
G
3 11ALPHA-D-MANNOPYRANOSE
lig 10
H1M
H
1 15 MANNOPYRANOSIDE
lig 11
MAN
H
2 11ALPHA-D-MANNOPYRANOSE
lig 12
MAN
H
3 11ALPHA-D-MANNOPYRANOSE
lig 13
MN
A
238 1MANGANESE (II) ION
lig 14
CA
A
239 1CALCIUM ION
lig 15
GOL
A
900 6GLYCEROL
lig 16
MN
B
238 1MANGANESE (II) ION
lig 17
CA
B
239 1CALCIUM ION
lig 18
GOL
B
900 6GLYCEROL
lig 19
MN
C
238 1MANGANESE (II) ION
lig 20
CA
C
239 1CALCIUM ION
lig 21
GOL
C
900 6GLYCEROL
lig 22
MN
D
238 1MANGANESE (II) ION
lig 23
CA
D
239 1CALCIUM ION
lig 24
GOL
D
900 6GLYCEROL