Analysis of Ligand-Protein Contacts in PDB entry:
3DEQ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 3DEQ. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
MG
A
401 1MAGNESIUM ION
lig 2
ALA
A
411 5ALANINE
lig 3
LEU
A
412 9LEUCINE
lig 4
MG
B
401 1MAGNESIUM ION
lig 5
ALA
B
411 5ALANINE
lig 6
LEU
B
412 9LEUCINE
lig 7
MG
C
401 1MAGNESIUM ION
lig 8
ALA
C
411 5ALANINE
lig 9
LEU
C
412 9LEUCINE
lig 10
MG
D
401 1MAGNESIUM ION
lig 11
ALA
D
411 5ALANINE
lig 12
LEU
D
412 9LEUCINE