Analysis of Ligand-Protein Contacts in PDB entry:
3DGC


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 22 ligands in PDB entry 3DGC. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
A
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
A
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
A
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
A
4 11ALPHA-D-MANNOPYRANOSE
lig 5
FUC
A
5 10ALPHA-L-FUCOPYRANOSE
lig 6
U1
L
8 1URANIUM ATOM
lig 7
U1
L
11 1URANIUM ATOM
lig 8
CL
R
3 1CHLORIDE ION
lig 9
U1
R
2 1URANIUM ATOM
lig 10
U1
R
4 1URANIUM ATOM
lig 11
U1
R
6 1URANIUM ATOM
lig 12
U1
R
7 1URANIUM ATOM
lig 13
IUM
M
1 3URANYL (VI) ION
lig 14
ACT
M
180 4ACETATE ION
lig 15
ACT
M
2 4ACETATE ION
lig 16
U1
M
9 1URANIUM ATOM
lig 17
U1
M
10 1URANIUM ATOM
lig 18
U1
M
12 1URANIUM ATOM
lig 19
CL
S
1 1CHLORIDE ION
lig 20
CL
S
2 1CHLORIDE ION
lig 21
U1
S
3 1URANIUM ATOM
lig 22
U1
S
5 1URANIUM ATOM