Analysis of Ligand-Protein Contacts in PDB entry:
3DGD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 30 ligands in PDB entry 3DGD. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
ZN
A
128 1ZINC ION
lig 2
ZN
A
129 1ZINC ION
lig 3
ZN
A
130 1ZINC ION
lig 4
ACT
A
131 4ACETATE ION
lig 5
ACT
A
132 4ACETATE ION
lig 6
ZN
A
133 1ZINC ION
lig 7
ZN
B
128 1ZINC ION
lig 8
ZN
B
129 1ZINC ION
lig 9
ZN
B
130 1ZINC ION
lig 10
ACT
B
131 4ACETATE ION
lig 11
ACT
B
132 4ACETATE ION
lig 12
ACT
B
133 4ACETATE ION
lig 13
ZN
B
134 1ZINC ION
lig 14
GOL
B
135 6GLYCEROL
lig 15
GOL
B
136 6GLYCEROL
lig 16
ZN
C
128 1ZINC ION
lig 17
ZN
C
129 1ZINC ION
lig 18
ACT
C
130 4ACETATE ION
lig 19
ACT
C
131 4ACETATE ION
lig 20
ACT
C
132 4ACETATE ION
lig 21
ACT
C
133 4ACETATE ION
lig 22
ZN
C
134 1ZINC ION
lig 23
ZN
D
128 1ZINC ION
lig 24
ZN
D
129 1ZINC ION
lig 25
ZN
D
130 1ZINC ION
lig 26
ZN
D
131 1ZINC ION
lig 27
ACT
D
132 4ACETATE ION
lig 28
ACT
D
133 4ACETATE ION
lig 29
ACT
D
134 4ACETATE ION
lig 30
GOL
D
135 6GLYCEROL