Analysis of Ligand-Protein Contacts in PDB entry:
3DMD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 16 ligands in PDB entry 3DMD. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
SO4
B
323 5SULFATE ION
lig 2
SO4
B
324 5SULFATE ION
lig 3
SO4
B
325 5SULFATE ION
lig 4
GOL
B
326 6GLYCEROL
lig 5
SO4
A
323 5SULFATE ION
lig 6
SO4
A
324 5SULFATE ION
lig 7
SO4
A
325 5SULFATE ION
lig 8
SO4
A
326 5SULFATE ION
lig 9
GOL
A
327 6GLYCEROL
lig 10
SO4
C
323 5SULFATE ION
lig 11
SO4
C
324 5SULFATE ION
lig 12
SO4
C
325 5SULFATE ION
lig 13
GOL
C
326 6GLYCEROL
lig 14
GOL
C
327 6GLYCEROL
lig 15
GOL
C
328 6GLYCEROL
lig 16
GOL
C
329 6GLYCEROL