Analysis of Ligand-Protein Contacts in PDB entry:
3DTV


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 18 ligands in PDB entry 3DTV. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
CME
B
148 10S,S-(2-HYDROXYETHYL)THIOCYSTEINE
lig 2
CME
C
148 10S,S-(2-HYDROXYETHYL)THIOCYSTEINE
lig 3
CME
D
188 10S,S-(2-HYDROXYETHYL)THIOCYSTEINE
lig 4
SO4
A
1000 5SULFATE ION
lig 5
SO4
A
1001 5SULFATE ION
lig 6
SO4
A
1002 5SULFATE ION
lig 7
SO4
A
1003 5SULFATE ION
lig 8
GOL
A
1100 6GLYCEROL
lig 9
SO4
B
1004 5SULFATE ION
lig 10
SO4
B
1005 5SULFATE ION
lig 11
SO4
B
1006 5SULFATE ION
lig 12
BME
B
1101 4BETA-MERCAPTOETHANOL
lig 13
GOL
B
1102 6GLYCEROL
lig 14
SO4
C
1007 5SULFATE ION
lig 15
SO4
C
1008 5SULFATE ION
lig 16
GOL
C
1103 6GLYCEROL
lig 17
SO4
D
1009 5SULFATE ION
lig 18
GOL
D
1104 6GLYCEROL