Analysis of Ligand-Protein Contacts in PDB entry:
3E6Q


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 47 ligands in PDB entry 3E6Q. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
EDO
A
310 41,2-ETHANEDIOL
lig 2
FMT
A
325 3FORMIC ACID
lig 3
FMT
A
333 3FORMIC ACID
lig 4
FMT
A
335 3FORMIC ACID
lig 5
ACT
A
337 4ACETATE ION
lig 6
NA
A
343 1SODIUM ION
lig 7
GOL
B
304 6GLYCEROL
lig 8
EDO
B
309 41,2-ETHANEDIOL
lig 9
FMT
B
332 3FORMIC ACID
lig 10
NA
B
344 1SODIUM ION
lig 11
FMT
B
345 3FORMIC ACID
lig 12
GOL
C
303 6GLYCEROL
lig 13
EDO
C
318 41,2-ETHANEDIOL
lig 14
EDO
D
313 41,2-ETHANEDIOL
lig 15
GOL
E
301 6GLYCEROL
lig 16
GOL
E
306 6GLYCEROL
lig 17
EDO
E
322 41,2-ETHANEDIOL
lig 18
ACT
E
338 4ACETATE ION
lig 19
EDO
F
312 41,2-ETHANEDIOL
lig 20
FMT
F
324 3FORMIC ACID
lig 21
FMT
F
326 3FORMIC ACID
lig 22
NA
F
342 1SODIUM ION
lig 23
EDO
G
319 41,2-ETHANEDIOL
lig 24
NA
G
341 1SODIUM ION
lig 25
GOL
H
302 6GLYCEROL
lig 26
GOL
H
305 6GLYCEROL
lig 27
EDO
H
311 41,2-ETHANEDIOL
lig 28
EDO
H
321 41,2-ETHANEDIOL
lig 29
FMT
H
327 3FORMIC ACID
lig 30
FMT
H
328 3FORMIC ACID
lig 31
FMT
H
334 3FORMIC ACID
lig 32
EDO
I
314 41,2-ETHANEDIOL
lig 33
EDO
I
315 41,2-ETHANEDIOL
lig 34
EDO
I
317 41,2-ETHANEDIOL
lig 35
FMT
I
329 3FORMIC ACID
lig 36
FMT
I
330 3FORMIC ACID
lig 37
GOL
J
307 6GLYCEROL
lig 38
EDO
J
316 41,2-ETHANEDIOL
lig 39
IMD
J
340 5IMIDAZOLE
lig 40
EDO
K
308 41,2-ETHANEDIOL
lig 41
EDO
K
323 41,2-ETHANEDIOL
lig 42
EDO
K
324 41,2-ETHANEDIOL
lig 43
EDO
L
320 41,2-ETHANEDIOL
lig 44
FMT
L
331 3FORMIC ACID
lig 45
FMT
L
336 3FORMIC ACID
lig 46
IMD
L
339 5IMIDAZOLE
lig 47
FMT
L
340 3FORMIC ACID