Analysis of Ligand-Protein Contacts in PDB entry:
3EE5


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 38 ligands in PDB entry 3EE5. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
GAL
D
1 11BETA-D-GALACTOPYRANOSE
lig 2
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
GAL
E
1 11BETA-D-GALACTOPYRANOSE
lig 4
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
GAL
F
1 11BETA-D-GALACTOPYRANOSE
lig 6
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
UDH
A
399 326-AMINOHEXYL-URIDINE-C1,5'-DIPHOSPHATE
lig 8
2NA
A
100 12NAPHTHALEN-2-YLMETHANOL
lig 9
SO4
A
602 5SULFATE ION
lig 10
SO4
A
604 5SULFATE ION
lig 11
SO4
A
607 5SULFATE ION
lig 12
SO4
A
609 5SULFATE ION
lig 13
SO4
A
610 5SULFATE ION
lig 14
MN
A
611 1MANGANESE (II) ION
lig 15
GOL
A
417 6GLYCEROL
lig 16
GOL
A
420 6GLYCEROL
lig 17
UDH
B
1399 326-AMINOHEXYL-URIDINE-C1,5'-DIPHOSPHATE
lig 18
2NA
B
101 12NAPHTHALEN-2-YLMETHANOL
lig 19
GOL
B
414 6GLYCEROL
lig 20
GOL
B
415 6GLYCEROL
lig 21
GOL
B
416 6GLYCEROL
lig 22
GOL
B
419 6GLYCEROL
lig 23
SO4
B
601 5SULFATE ION
lig 24
SO4
B
603 5SULFATE ION
lig 25
SO4
B
605 5SULFATE ION
lig 26
SO4
B
606 5SULFATE ION
lig 27
SO4
B
611 5SULFATE ION
lig 28
SO4
B
613 5SULFATE ION
lig 29
SO4
B
614 5SULFATE ION
lig 30
MN
B
400 1MANGANESE (II) ION
lig 31
UDH
C
2399 326-AMINOHEXYL-URIDINE-C1,5'-DIPHOSPHATE
lig 32
2NA
C
102 12NAPHTHALEN-2-YLMETHANOL
lig 33
GOL
C
418 6GLYCEROL
lig 34
DIO
C
435 61,4-DIETHYLENE DIOXIDE
lig 35
MES
C
436 122-(N-MORPHOLINO)-ETHANESULFONIC ACID
lig 36
SO4
C
608 5SULFATE ION
lig 37
SO4
C
612 5SULFATE ION
lig 38
MN
C
400 1MANGANESE (II) ION