Analysis of Ligand-Protein Contacts in PDB entry:
3EJD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 18 ligands in PDB entry 3EJD. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
ZMQ
A
99 38 ENETHIOATE
lig 2
HTG
A
100 15HEPTYL 1-THIO-BETA-D-GLUCOPYRANOSIDE
lig 3
HTG
A
101 7HEPTYL 1-THIO-BETA-D-GLUCOPYRANOSIDE
lig 4
HEM
B
405 43PROTOPORPHYRIN IX CONTAINING FE
lig 5
CL
B
416 1CHLORIDE ION
lig 6
ZMQ
C
99 38 ENETHIOATE
lig 7
HTG
C
100 12HEPTYL 1-THIO-BETA-D-GLUCOPYRANOSIDE
lig 8
HEM
D
405 43PROTOPORPHYRIN IX CONTAINING FE
lig 9
HTG
D
417 5HEPTYL 1-THIO-BETA-D-GLUCOPYRANOSIDE
lig 10
ZMQ
E
99 38 ENETHIOATE
lig 11
HTG
E
100 12HEPTYL 1-THIO-BETA-D-GLUCOPYRANOSIDE
lig 12
HEM
F
405 43PROTOPORPHYRIN IX CONTAINING FE
lig 13
HTG
F
417 6HEPTYL 1-THIO-BETA-D-GLUCOPYRANOSIDE
lig 14
CL
F
418 1CHLORIDE ION
lig 15
ZMQ
G
99 38 ENETHIOATE
lig 16
HTG
G
100 12HEPTYL 1-THIO-BETA-D-GLUCOPYRANOSIDE
lig 17
HEM
H
405 43PROTOPORPHYRIN IX CONTAINING FE
lig 18
HTG
H
417 7HEPTYL 1-THIO-BETA-D-GLUCOPYRANOSIDE