Analysis of Ligand-Protein Contacts in PDB entry:
3FAQ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 24 ligands in PDB entry 3FAQ. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
SEP
A
198 10PHOSPHOSERINE
lig 2
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
MAN
D
3 11ALPHA-D-MANNOPYRANOSE
lig 9
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 12
MAN
E
4 11ALPHA-D-MANNOPYRANOSE
lig 13
HEM
A
601 43PROTOPORPHYRIN IX CONTAINING FE
lig 14
SCN
A
602 3THIOCYANATE ION
lig 15
SCN
A
603 3THIOCYANATE ION
lig 16
CA
A
604 1CALCIUM ION
lig 17
CYN
A
605 2CYANIDE ION
lig 18
IOD
A
606 1IODIDE ION
lig 19
IOD
A
607 1IODIDE ION
lig 20
IOD
A
608 1IODIDE ION
lig 21
IOD
A
609 1IODIDE ION
lig 22
IOD
A
610 1IODIDE ION
lig 23
IOD
A
611 1IODIDE ION
lig 24
IOD
A
612 1IODIDE ION