Analysis of Ligand-Protein Contacts in PDB entry:
3GVK


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 27 ligands in PDB entry 3GVK. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
SLB
D
1 21N-ACETYL-BETA-NEURAMINIC ACID
lig 2
SIA
D
2 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 3
SIA
D
3 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 4
SLB
E
1 21N-ACETYL-BETA-NEURAMINIC ACID
lig 5
SIA
E
2 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 6
SIA
E
3 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 7
SLB
F
1 21N-ACETYL-BETA-NEURAMINIC ACID
lig 8
SIA
F
2 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 9
SLB
G
1 21N-ACETYL-BETA-NEURAMINIC ACID
lig 10
SIA
G
2 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 11
SIA
G
3 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 12
SLB
H
1 21N-ACETYL-BETA-NEURAMINIC ACID
lig 13
SIA
H
2 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 14
SIA
H
3 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 15
SLB
I
1 21N-ACETYL-BETA-NEURAMINIC ACID
lig 16
SIA
I
2 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 17
SLB
J
1 21N-ACETYL-BETA-NEURAMINIC ACID
lig 18
SIA
J
2 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 19
SIA
J
3 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 20
SLB
K
1 21N-ACETYL-BETA-NEURAMINIC ACID
lig 21
SIA
K
2 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 22
SIA
K
3 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 23
SLB
L
1 21N-ACETYL-BETA-NEURAMINIC ACID
lig 24
SIA
L
2 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 25
NA
A
1001 1SODIUM ION
lig 26
NA
B
1001 1SODIUM ION
lig 27
NA
C
1001 1SODIUM ION