Analysis of Ligand-Protein Contacts in PDB entry:
3I3D

Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 185 ligands in PDB entry 3I3D. Click on ligand of interest for LPC analysis.

	HET ID	Chain ID	Residue N	Number of atoms	Ligand name
lig 1	IPT	A	2001	15	1-METHYLETHYL 1-THIO-BETA-D-GALACTOPYRANOS
lig 2	IPT	A	2002	15	1-METHYLETHYL 1-THIO-BETA-D-GALACTOPYRANOS
lig 3	MG	A	3001	1	MAGNESIUM ION
lig 4	MG	A	3002	1	MAGNESIUM ION
lig 5	MG	A	3004	1	MAGNESIUM ION
lig 6	NA	A	3101	1	SODIUM ION
lig 7	NA	A	3102	1	SODIUM ION
lig 8	NA	A	3103	1	SODIUM ION
lig 9	NA	A	3104	1	SODIUM ION
lig 10	DMS	A	9001	4	DIMETHYL SULFOXIDE
lig 11	DMS	A	9002	4	DIMETHYL SULFOXIDE
lig 12	DMS	A	9003	4	DIMETHYL SULFOXIDE
lig 13	DMS	A	9004	4	DIMETHYL SULFOXIDE
lig 14	DMS	A	9005	4	DIMETHYL SULFOXIDE
lig 15	DMS	A	9006	4	DIMETHYL SULFOXIDE
lig 16	DMS	A	9007	4	DIMETHYL SULFOXIDE
lig 17	DMS	A	9008	4	DIMETHYL SULFOXIDE
lig 18	DMS	A	9009	4	DIMETHYL SULFOXIDE
lig 19	DMS	A	9010	4	DIMETHYL SULFOXIDE
lig 20	DMS	A	9011	4	DIMETHYL SULFOXIDE
lig 21	DMS	A	9012	4	DIMETHYL SULFOXIDE
lig 22	DMS	A	9013	4	DIMETHYL SULFOXIDE
lig 23	DMS	A	9014	4	DIMETHYL SULFOXIDE
lig 24	DMS	A	9015	4	DIMETHYL SULFOXIDE
lig 25	DMS	A	9016	4	DIMETHYL SULFOXIDE
lig 26	DMS	A	9017	4	DIMETHYL SULFOXIDE
lig 27	DMS	A	9018	4	DIMETHYL SULFOXIDE
lig 28	DMS	A	9019	4	DIMETHYL SULFOXIDE
lig 29	DMS	A	9020	4	DIMETHYL SULFOXIDE
lig 30	DMS	A	9021	4	DIMETHYL SULFOXIDE
lig 31	DMS	A	9022	4	DIMETHYL SULFOXIDE
lig 32	DMS	A	9023	4	DIMETHYL SULFOXIDE
lig 33	DMS	A	9024	4	DIMETHYL SULFOXIDE
lig 34	DMS	A	9026	4	DIMETHYL SULFOXIDE
lig 35	DMS	A	9028	4	DIMETHYL SULFOXIDE
lig 36	DMS	A	9029	4	DIMETHYL SULFOXIDE
lig 37	DMS	A	9030	4	DIMETHYL SULFOXIDE
lig 38	DMS	A	9031	4	DIMETHYL SULFOXIDE
lig 39	DMS	A	9032	4	DIMETHYL SULFOXIDE
lig 40	DMS	A	9033	4	DIMETHYL SULFOXIDE
lig 41	DMS	A	9034	4	DIMETHYL SULFOXIDE
lig 42	DMS	A	9035	4	DIMETHYL SULFOXIDE
lig 43	DMS	A	9036	4	DIMETHYL SULFOXIDE
lig 44	IPT	B	2001	15	1-METHYLETHYL 1-THIO-BETA-D-GALACTOPYRANOS
lig 45	MG	B	3001	1	MAGNESIUM ION
lig 46	MG	B	3002	1	MAGNESIUM ION
lig 47	MG	B	3004	1	MAGNESIUM ION
lig 48	MG	B	3005	1	MAGNESIUM ION
lig 49	NA	B	3101	1	SODIUM ION
lig 50	NA	B	3102	1	SODIUM ION
lig 51	NA	B	3103	1	SODIUM ION
lig 52	NA	B	3104	1	SODIUM ION
lig 53	NA	B	3105	1	SODIUM ION
lig 54	DMS	B	9001	4	DIMETHYL SULFOXIDE
lig 55	DMS	B	9002	4	DIMETHYL SULFOXIDE
lig 56	DMS	B	9003	4	DIMETHYL SULFOXIDE
lig 57	DMS	B	9004	4	DIMETHYL SULFOXIDE
lig 58	DMS	B	9005	4	DIMETHYL SULFOXIDE
lig 59	DMS	B	9006	4	DIMETHYL SULFOXIDE
lig 60	DMS	B	9007	4	DIMETHYL SULFOXIDE
lig 61	DMS	B	9008	4	DIMETHYL SULFOXIDE
lig 62	DMS	B	9009	4	DIMETHYL SULFOXIDE
lig 63	DMS	B	9010	4	DIMETHYL SULFOXIDE
lig 64	DMS	B	9011	4	DIMETHYL SULFOXIDE
lig 65	DMS	B	9012	4	DIMETHYL SULFOXIDE
lig 66	DMS	B	9013	4	DIMETHYL SULFOXIDE
lig 67	DMS	B	9014	4	DIMETHYL SULFOXIDE
lig 68	DMS	B	9015	4	DIMETHYL SULFOXIDE
lig 69	DMS	B	9016	4	DIMETHYL SULFOXIDE
lig 70	DMS	B	9017	4	DIMETHYL SULFOXIDE
lig 71	DMS	B	9018	4	DIMETHYL SULFOXIDE
lig 72	DMS	B	9019	4	DIMETHYL SULFOXIDE
lig 73	DMS	B	9020	4	DIMETHYL SULFOXIDE
lig 74	DMS	B	9021	4	DIMETHYL SULFOXIDE
lig 75	DMS	B	9022	4	DIMETHYL SULFOXIDE
lig 76	DMS	B	9023	4	DIMETHYL SULFOXIDE
lig 77	DMS	B	9024	4	DIMETHYL SULFOXIDE
lig 78	DMS	B	9025	4	DIMETHYL SULFOXIDE
lig 79	DMS	B	9026	4	DIMETHYL SULFOXIDE
lig 80	DMS	B	9027	4	DIMETHYL SULFOXIDE
lig 81	DMS	B	9029	4	DIMETHYL SULFOXIDE
lig 82	DMS	B	9030	4	DIMETHYL SULFOXIDE
lig 83	DMS	B	9032	4	DIMETHYL SULFOXIDE
lig 84	DMS	B	9033	4	DIMETHYL SULFOXIDE
lig 85	DMS	B	9034	4	DIMETHYL SULFOXIDE
lig 86	DMS	B	9035	4	DIMETHYL SULFOXIDE
lig 87	DMS	B	9036	4	DIMETHYL SULFOXIDE
lig 88	DMS	B	9037	4	DIMETHYL SULFOXIDE
lig 89	DMS	B	9038	4	DIMETHYL SULFOXIDE
lig 90	DMS	B	9039	4	DIMETHYL SULFOXIDE
lig 91	DMS	B	9040	4	DIMETHYL SULFOXIDE
lig 92	DMS	B	9041	4	DIMETHYL SULFOXIDE
lig 93	DMS	B	9042	4	DIMETHYL SULFOXIDE
lig 94	DMS	B	9043	4	DIMETHYL SULFOXIDE
lig 95	IPT	C	2001	15	1-METHYLETHYL 1-THIO-BETA-D-GALACTOPYRANOS
lig 96	MG	C	3001	1	MAGNESIUM ION
lig 97	MG	C	3002	1	MAGNESIUM ION
lig 98	MG	C	3004	1	MAGNESIUM ION
lig 99	NA	C	3101	1	SODIUM ION
lig 100	NA	C	3102	1	SODIUM ION
lig 101	NA	C	3103	1	SODIUM ION
lig 102	NA	C	3104	1	SODIUM ION
lig 103	DMS	C	9001	4	DIMETHYL SULFOXIDE
lig 104	DMS	C	9002	4	DIMETHYL SULFOXIDE
lig 105	DMS	C	9003	4	DIMETHYL SULFOXIDE
lig 106	DMS	C	9004	4	DIMETHYL SULFOXIDE
lig 107	DMS	C	9005	4	DIMETHYL SULFOXIDE
lig 108	DMS	C	9006	4	DIMETHYL SULFOXIDE
lig 109	DMS	C	9007	4	DIMETHYL SULFOXIDE
lig 110	DMS	C	9008	4	DIMETHYL SULFOXIDE
lig 111	DMS	C	9009	4	DIMETHYL SULFOXIDE
lig 112	DMS	C	9010	4	DIMETHYL SULFOXIDE
lig 113	DMS	C	9011	4	DIMETHYL SULFOXIDE
lig 114	DMS	C	9013	4	DIMETHYL SULFOXIDE
lig 115	DMS	C	9014	4	DIMETHYL SULFOXIDE
lig 116	DMS	C	9015	4	DIMETHYL SULFOXIDE
lig 117	DMS	C	9016	4	DIMETHYL SULFOXIDE
lig 118	DMS	C	9017	4	DIMETHYL SULFOXIDE
lig 119	DMS	C	9018	4	DIMETHYL SULFOXIDE
lig 120	DMS	C	9019	4	DIMETHYL SULFOXIDE
lig 121	DMS	C	9020	4	DIMETHYL SULFOXIDE
lig 122	DMS	C	9021	4	DIMETHYL SULFOXIDE
lig 123	DMS	C	9022	4	DIMETHYL SULFOXIDE
lig 124	DMS	C	9023	4	DIMETHYL SULFOXIDE
lig 125	DMS	C	9024	4	DIMETHYL SULFOXIDE
lig 126	DMS	C	9025	4	DIMETHYL SULFOXIDE
lig 127	DMS	C	9027	4	DIMETHYL SULFOXIDE
lig 128	DMS	C	9028	4	DIMETHYL SULFOXIDE
lig 129	DMS	C	9029	4	DIMETHYL SULFOXIDE
lig 130	DMS	C	9030	4	DIMETHYL SULFOXIDE
lig 131	DMS	C	9031	4	DIMETHYL SULFOXIDE
lig 132	DMS	C	9032	4	DIMETHYL SULFOXIDE
lig 133	DMS	C	9033	4	DIMETHYL SULFOXIDE
lig 134	DMS	C	9034	4	DIMETHYL SULFOXIDE
lig 135	DMS	C	9035	4	DIMETHYL SULFOXIDE
lig 136	DMS	C	9036	4	DIMETHYL SULFOXIDE
lig 137	DMS	C	9037	4	DIMETHYL SULFOXIDE
lig 138	DMS	C	9038	4	DIMETHYL SULFOXIDE
lig 139	DMS	C	9039	4	DIMETHYL SULFOXIDE
lig 140	DMS	C	9040	4	DIMETHYL SULFOXIDE
lig 141	DMS	C	9041	4	DIMETHYL SULFOXIDE
lig 142	DMS	C	9042	4	DIMETHYL SULFOXIDE
lig 143	DMS	C	9043	4	DIMETHYL SULFOXIDE
lig 144	DMS	C	9044	4	DIMETHYL SULFOXIDE
lig 145	IPT	D	2001	15	1-METHYLETHYL 1-THIO-BETA-D-GALACTOPYRANOS
lig 146	IPT	D	2002	15	1-METHYLETHYL 1-THIO-BETA-D-GALACTOPYRANOS
lig 147	MG	D	3001	1	MAGNESIUM ION
lig 148	MG	D	3002	1	MAGNESIUM ION
lig 149	MG	D	3004	1	MAGNESIUM ION
lig 150	NA	D	3101	1	SODIUM ION
lig 151	NA	D	3102	1	SODIUM ION
lig 152	NA	D	3103	1	SODIUM ION
lig 153	NA	D	3104	1	SODIUM ION
lig 154	DMS	D	9001	4	DIMETHYL SULFOXIDE
lig 155	DMS	D	9002	4	DIMETHYL SULFOXIDE
lig 156	DMS	D	9003	4	DIMETHYL SULFOXIDE
lig 157	DMS	D	9004	4	DIMETHYL SULFOXIDE
lig 158	DMS	D	9005	4	DIMETHYL SULFOXIDE
lig 159	DMS	D	9006	4	DIMETHYL SULFOXIDE
lig 160	DMS	D	9007	4	DIMETHYL SULFOXIDE
lig 161	DMS	D	9008	4	DIMETHYL SULFOXIDE
lig 162	DMS	D	9009	4	DIMETHYL SULFOXIDE
lig 163	DMS	D	9010	4	DIMETHYL SULFOXIDE
lig 164	DMS	D	9011	4	DIMETHYL SULFOXIDE
lig 165	DMS	D	9012	4	DIMETHYL SULFOXIDE
lig 166	DMS	D	9013	4	DIMETHYL SULFOXIDE
lig 167	DMS	D	9014	4	DIMETHYL SULFOXIDE
lig 168	DMS	D	9015	4	DIMETHYL SULFOXIDE
lig 169	DMS	D	9016	4	DIMETHYL SULFOXIDE
lig 170	DMS	D	9017	4	DIMETHYL SULFOXIDE
lig 171	DMS	D	9018	4	DIMETHYL SULFOXIDE
lig 172	DMS	D	9019	4	DIMETHYL SULFOXIDE
lig 173	DMS	D	9020	4	DIMETHYL SULFOXIDE
lig 174	DMS	D	9022	4	DIMETHYL SULFOXIDE
lig 175	DMS	D	9023	4	DIMETHYL SULFOXIDE
lig 176	DMS	D	9024	4	DIMETHYL SULFOXIDE
lig 177	DMS	D	5025	4	DIMETHYL SULFOXIDE
lig 178	DMS	D	5026	4	DIMETHYL SULFOXIDE
lig 179	DMS	D	5027	4	DIMETHYL SULFOXIDE
lig 180	DMS	D	5028	4	DIMETHYL SULFOXIDE
lig 181	DMS	D	5030	4	DIMETHYL SULFOXIDE
lig 182	DMS	D	9025	4	DIMETHYL SULFOXIDE
lig 183	DMS	D	9026	4	DIMETHYL SULFOXIDE
lig 184	DMS	D	9027	4	DIMETHYL SULFOXIDE
lig 185	DMS	D	9028	4	DIMETHYL SULFOXIDE

Analysis of Ligand-Protein Contacts in PDB entry: 3I3D

Analysis of Ligand-Protein Contacts in PDB entry:
3I3D