Analysis of Ligand-Protein Contacts in PDB entry:
3JD4


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 18 ligands in PDB entry 3JD4. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAI
A
601 441,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTI
lig 2
GTP
A
602 32GUANOSINE-5'-TRIPHOSPHATE
lig 3
NAI
A
603 441,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTI
lig 4
NAI
B
602 441,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTI
lig 5
GTP
B
603 32GUANOSINE-5'-TRIPHOSPHATE
lig 6
NAI
B
601 441,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTI
lig 7
NAI
C
601 441,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTI
lig 8
NAI
C
602 441,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTI
lig 9
GTP
C
603 32GUANOSINE-5'-TRIPHOSPHATE
lig 10
NAI
D
601 441,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTI
lig 11
GTP
D
602 32GUANOSINE-5'-TRIPHOSPHATE
lig 12
NAI
D
603 441,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTI
lig 13
NAI
E
602 441,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTI
lig 14
GTP
E
603 32GUANOSINE-5'-TRIPHOSPHATE
lig 15
NAI
E
601 441,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTI
lig 16
NAI
F
601 441,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTI
lig 17
NAI
F
602 441,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTI
lig 18
GTP
F
603 32GUANOSINE-5'-TRIPHOSPHATE