Analysis of Ligand-Protein Contacts in PDB entry:
3KB6


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 42 ligands in PDB entry 3KB6. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
PPI
A
398 5PROPANOIC ACID
lig 2
LAC
A
399 6LACTIC ACID
lig 3
NAD
A
400 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 4
PEG
A
403 7DI(HYDROXYETHYL)ETHER
lig 5
1PE
A
404 13PENTAETHYLENE GLYCOL
lig 6
PPI
A
453 5PROPANOIC ACID
lig 7
PEG
A
454 7DI(HYDROXYETHYL)ETHER
lig 8
1PE
A
444 13PENTAETHYLENE GLYCOL
lig 9
PEG
A
555 7DI(HYDROXYETHYL)ETHER
lig 10
1PE
A
700 8PENTAETHYLENE GLYCOL
lig 11
GOL
A
710 6GLYCEROL
lig 12
GOL
A
800 6GLYCEROL
lig 13
1PE
A
335 10PENTAETHYLENE GLYCOL
lig 14
PEG
A
701 7DI(HYDROXYETHYL)ETHER
lig 15
PEG
A
802 7DI(HYDROXYETHYL)ETHER
lig 16
PEG
A
803 6DI(HYDROXYETHYL)ETHER
lig 17
PEG
A
772 7DI(HYDROXYETHYL)ETHER
lig 18
GOL
B
711 6GLYCEROL
lig 19
PPI
B
398 5PROPANOIC ACID
lig 20
LAC
B
399 6LACTIC ACID
lig 21
NAD
B
400 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 22
GOL
B
770 6GLYCEROL
lig 23
1PE
B
407 13PENTAETHYLENE GLYCOL
lig 24
1PE
B
404 15PENTAETHYLENE GLYCOL
lig 25
GOL
B
777 6GLYCEROL
lig 26
GOL
B
800 6GLYCEROL
lig 27
GOL
B
801 6GLYCEROL
lig 28
1PE
B
804 10PENTAETHYLENE GLYCOL
lig 29
PEG
C
702 7DI(HYDROXYETHYL)ETHER
lig 30
PPI
C
398 5PROPANOIC ACID
lig 31
LAC
C
399 6LACTIC ACID
lig 32
NAD
C
400 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 33
GOL
C
401 6GLYCEROL
lig 34
1PE
C
404 10PENTAETHYLENE GLYCOL
lig 35
GOL
C
650 6GLYCEROL
lig 36
PEG
C
771 7DI(HYDROXYETHYL)ETHER
lig 37
PPI
D
398 5PROPANOIC ACID
lig 38
LAC
D
399 6LACTIC ACID
lig 39
NAD
D
400 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 40
GOL
D
401 6GLYCEROL
lig 41
GOL
D
777 6GLYCEROL
lig 42
PEG
D
405 7DI(HYDROXYETHYL)ETHER