Analysis of Ligand-Protein Contacts in PDB entry:
3KPD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 7 ligands in PDB entry 3KPD. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
MTA
A
1 205'-DEOXY-5'-METHYLTHIOADENOSINE
lig 2
MTA
A
2 205'-DEOXY-5'-METHYLTHIOADENOSINE
lig 3
SAM
B
1000 27S-ADENOSYLMETHIONINE
lig 4
SAM
C
1000 27S-ADENOSYLMETHIONINE
lig 5
MTA
C
1 205'-DEOXY-5'-METHYLTHIOADENOSINE
lig 6
MTA
D
1 205'-DEOXY-5'-METHYLTHIOADENOSINE
lig 7
MTA
D
2 205'-DEOXY-5'-METHYLTHIOADENOSINE