Analysis of Ligand-Protein Contacts in PDB entry:
3M5J


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 19 ligands in PDB entry 3M5J. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
GAL
G
1 12BETA-D-GALACTOPYRANOSE
lig 2
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
GAL
G
3 11BETA-D-GALACTOPYRANOSE
lig 4
SIA
G
4 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 5
NAG
H
1 132-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
SIA
H
2 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 7
NAG
I
1 132-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
SIA
I
2 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 9
NAG
A
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
B
183 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
GOL
B
184 6GLYCEROL
lig 12
GOL
B
185 6GLYCEROL
lig 13
GOL
B
186 6GLYCEROL
lig 14
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
D
183 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
GOL
D
184 6GLYCEROL
lig 17
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
F
183 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
GOL
F
184 6GLYCEROL