Analysis of Ligand-Protein Contacts in PDB entry:
3MDB


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 14 ligands in PDB entry 3MDB. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
UNX
A
1 1UNKNOWN ATOM OR ION
lig 2
UNX
A
5 1UNKNOWN ATOM OR ION
lig 3
UNX
B
11 1UNKNOWN ATOM OR ION
lig 4
ZN
C
401 1ZINC ION
lig 5
IP9
C
375 28 PHOSPHORYL]OXY}PROPANE -1,2-DIYL DIOCTANO
lig 6
UNX
C
376 1UNKNOWN ATOM OR ION
lig 7
UNX
C
377 1UNKNOWN ATOM OR ION
lig 8
UNX
C
378 1UNKNOWN ATOM OR ION
lig 9
ZN
D
401 1ZINC ION
lig 10
UNX
D
375 1UNKNOWN ATOM OR ION
lig 11
UNX
D
376 1UNKNOWN ATOM OR ION
lig 12
UNX
D
377 1UNKNOWN ATOM OR ION
lig 13
UNX
D
378 1UNKNOWN ATOM OR ION
lig 14
UNX
D
379 1UNKNOWN ATOM OR ION