Analysis of Ligand-Protein Contacts in PDB entry:
3MSD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 9 ligands in PDB entry 3MSD. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
XYP
C
1 10BETA-D-XYLOPYRANOSE
lig 2
XYP
C
2 9BETA-D-XYLOPYRANOSE
lig 3
XYP
D
1 10BETA-D-XYLOPYRANOSE
lig 4
XYP
D
2 9BETA-D-XYLOPYRANOSE
lig 5
GOL
A
482 6GLYCEROL
lig 6
NA
A
401 1SODIUM ION
lig 7
ACT
A
337 4ACETATE ION
lig 8
GOL
B
481 6GLYCEROL
lig 9
NA
B
402 1SODIUM ION