Analysis of Ligand-Protein Contacts in PDB entry:
3NDU


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 25 ligands in PDB entry 3NDU. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
ARF
A
1 3FORMAMIDE
lig 2
ARF
B
1 3FORMAMIDE
lig 3
ROC
A
101 49 (QUINOLIN-2-YLCARBONYLAMINO)BUTANEDIAMIDE
lig 4
DMS
A
102 4DIMETHYL SULFOXIDE
lig 5
ACT
A
1007 4ACETATE ION
lig 6
CL
A
1010 1CHLORIDE ION
lig 7
GOL
A
1012 6GLYCEROL
lig 8
NA
A
1015 1SODIUM ION
lig 9
ACT
A
1017 4ACETATE ION
lig 10
CL
A
1021 1CHLORIDE ION
lig 11
DMS
B
101 4DIMETHYL SULFOXIDE
lig 12
GOL
B
1001 6GLYCEROL
lig 13
CL
B
1003 1CHLORIDE ION
lig 14
CL
B
1005 1CHLORIDE ION
lig 15
NA
B
1014 1SODIUM ION
lig 16
ACT
B
1016 4ACETATE ION
lig 17
NA
B
1020 1SODIUM ION
lig 18
DMS
C
100 4DIMETHYL SULFOXIDE
lig 19
DMS
C
101 4DIMETHYL SULFOXIDE
lig 20
CL
C
1004 1CHLORIDE ION
lig 21
CL
C
1006 1CHLORIDE ION
lig 22
ACT
C
1008 4ACETATE ION
lig 23
GOL
C
1013 6GLYCEROL
lig 24
ROC
D
100 49 (QUINOLIN-2-YLCARBONYLAMINO)BUTANEDIAMIDE
lig 25
DMS
D
101 4DIMETHYL SULFOXIDE