Analysis of Ligand-Protein Contacts in PDB entry:
3NW8


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 30 ligands in PDB entry 3NW8. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
B
1141 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
B
1398 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
MRY
B
2000 8MESO-ERYTHRITOL
lig 8
MRY
B
2001 8MESO-ERYTHRITOL
lig 9
NAG
B
1674 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NA
B
2 1SODIUM ION
lig 11
NAG
A
1398 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
A
1430 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
A
1674 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
MRY
A
2000 8MESO-ERYTHRITOL
lig 15
MRY
A
2001 8MESO-ERYTHRITOL
lig 16
MRY
A
2002 8MESO-ERYTHRITOL
lig 17
NAG
A
1141 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
CL
A
5 1CHLORIDE ION
lig 19
MRY
A
731 8MESO-ERYTHRITOL
lig 20
MRY
C
2000 8MESO-ERYTHRITOL
lig 21
MRY
C
2001 8MESO-ERYTHRITOL
lig 22
NAG
C
1430 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
NAG
C
1674 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
MRY
C
2002 8MESO-ERYTHRITOL
lig 25
NA
C
1 1SODIUM ION
lig 26
NA
C
4 1SODIUM ION
lig 27
NAG
D
1141 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
NAG
D
1430 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
MRY
D
2000 8MESO-ERYTHRITOL
lig 30
NA
D
3 1SODIUM ION