Analysis of Ligand-Protein Contacts in PDB entry:
3PKQ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 3PKQ. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
DGT
A
500 312'-DEOXYGUANOSINE-5'-TRIPHOSPHATE
lig 2
MG
A
501 1MAGNESIUM ION
lig 3
PEG
A
293 7DI(HYDROXYETHYL)ETHER
lig 4
PEG
A
294 7DI(HYDROXYETHYL)ETHER
lig 5
DGT
B
500 312'-DEOXYGUANOSINE-5'-TRIPHOSPHATE
lig 6
MG
B
501 1MAGNESIUM ION
lig 7
MG
B
502 1MAGNESIUM ION
lig 8
DGT
C
500 312'-DEOXYGUANOSINE-5'-TRIPHOSPHATE
lig 9
MG
C
501 1MAGNESIUM ION
lig 10
PEG
C
293 7DI(HYDROXYETHYL)ETHER
lig 11
DGT
D
500 312'-DEOXYGUANOSINE-5'-TRIPHOSPHATE
lig 12
MG
D
502 1MAGNESIUM ION