Analysis of Ligand-Protein Contacts in PDB entry:
3QHR


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 29 ligands in PDB entry 3QHR. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
TPO
A
160 11PHOSPHOTHREONINE
lig 2
TPO
C
160 11PHOSPHOTHREONINE
lig 3
ADP
A
297 27ADENOSINE-5'-DIPHOSPHATE
lig 4
MG
A
298 1MAGNESIUM ION
lig 5
MG
A
299 1MAGNESIUM ION
lig 6
MGF
A
300 4TRIFLUOROMAGNESATE
lig 7
CL
A
301 1CHLORIDE ION
lig 8
GOL
A
302 6GLYCEROL
lig 9
GOL
A
303 6GLYCEROL
lig 10
GOL
A
304 6GLYCEROL
lig 11
GOL
A
305 6GLYCEROL
lig 12
GOL
B
1 6GLYCEROL
lig 13
GOL
B
3 6GLYCEROL
lig 14
GOL
B
6 6GLYCEROL
lig 15
GOL
B
8 6GLYCEROL
lig 16
GOL
B
16 6GLYCEROL
lig 17
ADP
C
297 27ADENOSINE-5'-DIPHOSPHATE
lig 18
MG
C
298 1MAGNESIUM ION
lig 19
MG
C
299 1MAGNESIUM ION
lig 20
MGF
C
300 4TRIFLUOROMAGNESATE
lig 21
CL
C
301 1CHLORIDE ION
lig 22
GOL
C
302 6GLYCEROL
lig 23
GOL
C
303 6GLYCEROL
lig 24
GOL
D
2 6GLYCEROL
lig 25
GOL
D
5 6GLYCEROL
lig 26
GOL
D
7 6GLYCEROL
lig 27
GOL
D
13 6GLYCEROL
lig 28
GOL
D
15 6GLYCEROL
lig 29
GOL
K
12 6GLYCEROL