Analysis of Ligand-Protein Contacts in PDB entry:
3QNB


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 34 ligands in PDB entry 3QNB. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
KCX
A
70 12LYSINE NZ-CARBOXYLIC ACID
lig 2
KCX
B
70 12LYSINE NZ-CARBOXYLIC ACID
lig 3
KCX
C
70 12LYSINE NZ-CARBOXYLIC ACID
lig 4
KCX
D
70 12LYSINE NZ-CARBOXYLIC ACID
lig 5
SO4
A
4 5SULFATE ION
lig 6
SO4
A
6 5SULFATE ION
lig 7
EDO
A
2 41,2-ETHANEDIOL
lig 8
EDO
A
267 41,2-ETHANEDIOL
lig 9
EDO
A
9 41,2-ETHANEDIOL
lig 10
EDO
A
10 41,2-ETHANEDIOL
lig 11
EDO
A
12 41,2-ETHANEDIOL
lig 12
EDO
A
16 41,2-ETHANEDIOL
lig 13
EDO
A
268 41,2-ETHANEDIOL
lig 14
SO4
B
5 5SULFATE ION
lig 15
SO4
B
7 5SULFATE ION
lig 16
EDO
B
1 41,2-ETHANEDIOL
lig 17
EDO
B
3 41,2-ETHANEDIOL
lig 18
EDO
B
8 41,2-ETHANEDIOL
lig 19
EDO
B
14 41,2-ETHANEDIOL
lig 20
EDO
B
18 41,2-ETHANEDIOL
lig 21
SO4
C
2 5SULFATE ION
lig 22
EDO
C
6 41,2-ETHANEDIOL
lig 23
EDO
C
7 41,2-ETHANEDIOL
lig 24
EDO
C
17 41,2-ETHANEDIOL
lig 25
EDO
C
19 41,2-ETHANEDIOL
lig 26
EDO
C
20 41,2-ETHANEDIOL
lig 27
EDO
C
267 41,2-ETHANEDIOL
lig 28
SO4
D
1 5SULFATE ION
lig 29
SO4
D
3 5SULFATE ION
lig 30
EDO
D
5 41,2-ETHANEDIOL
lig 31
EDO
D
11 41,2-ETHANEDIOL
lig 32
EDO
D
13 41,2-ETHANEDIOL
lig 33
EDO
D
15 41,2-ETHANEDIOL
lig 34
EDO
D
267 41,2-ETHANEDIOL