Analysis of Ligand-Protein Contacts in PDB entry:
3RUN


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 19 ligands in PDB entry 3RUN. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
CCS
A
165 10CARBOXYMETHYLATED CYSTEINE
lig 2
DAL
A
167 5D-ALANINE
lig 3
DAL
A
168 6D-ALANINE
lig 4
MLU
B
1 9N-METHYL-D-LEUCINE
lig 5
OMZ
B
2 14(BETAR)-3-CHLORO-BETA-HYDROXY-D-TYROSINE
lig 6
GHP
B
4 11(2R)-AMINO(4-HYDROXYPHENYL)ETHANOIC ACID
lig 7
GHP
B
5 11(2R)-AMINO(4-HYDROXYPHENYL)ETHANOIC ACID
lig 8
OMY
B
6 14(BETAR)-3-CHLORO-BETA-HYDROXY-L-TYROSINE
lig 9
3FG
B
7 13(2S)-AMINO(3,5-DIHYDROXYPHENYL)ETHANOIC AC
lig 10
BGC
C
1 11BETA-D-GLUCOPYRANOSE
lig 11
RER
C
2 10VANCOSAMINE
lig 12
MPD
A
201 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 13
MRD
A
202 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 14
PO4
A
203 5PHOSPHATE ION
lig 15
TRS
A
204 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 16
CL
A
205 1CHLORIDE ION
lig 17
IPA
A
206 4ISOPROPYL ALCOHOL
lig 18
IPA
A
207 4ISOPROPYL ALCOHOL
lig 19
MRD
B
103 8(4R)-2-METHYLPENTANE-2,4-DIOL