Analysis of Ligand-Protein Contacts in PDB entry:
3SDZ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 15 ligands in PDB entry 3SDZ. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
MPD
A
589 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 2
MPD
A
590 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 3
MPD
A
591 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 4
MPD
A
592 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 5
ACY
A
593 4ACETIC ACID
lig 6
MPD
A
594 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 7
ACY
A
595 4ACETIC ACID
lig 8
ACY
A
596 4ACETIC ACID
lig 9
ACY
A
597 4ACETIC ACID
lig 10
ACY
A
598 4ACETIC ACID
lig 11
TRS
A
599 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 12
TRS
A
600 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 13
TRS
A
601 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 14
MPD
A
602 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 15
ACY
A
603 4ACETIC ACID